EGAF00005319094 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319094
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3314232
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	39203	1.1828683085553455	No Hit
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	6063	0.1829383096898467	No Hit
GTGGGGTGGGGGTGGGGGGGGCGCGCCGGCGCCCGCCGGGCTCCCCGGGG	5662	0.17083897566615736	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4998	0.15080416820548473	No Hit
GTGGGGTGGGGGGGGGGCGCGCCGGCGCCCGCCGGGCTCCCCGGGGGCGG	4829	0.1457049476319099	No Hit
TGGGGTGGGGGTGGGGGGGGCGCGCCGGCGCCCGCCGGGCTCCCCGGGGG	4717	0.14232558251806152	No Hit
GGGGTGGGGGTGGGGGGGGCGCGCCGGCGCCCGCCGGGCTCCCCGGGGGC	4683	0.14129970382278612	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGACCG	950	0.0	44.62403	70
TCGTTGG	765	0.0	38.6713	32
TTCGTTG	805	0.0	37.538933	31
CGTTGGA	790	0.0	36.63593	33
ACGATCG	85	4.0254236E-9	35.413277	6
CGGGAAT	575	0.0	34.742165	42
GATTTCG	585	0.0	34.449955	28
AAACGGG	965	0.0	32.493824	39
GAAACGG	970	0.0	31.913834	38
CGCGGCA	1980	0.0	31.619715	32
AACGGGA	840	0.0	31.57973	40
ATTTCGT	645	0.0	30.78247	29
CCGTCGC	2035	0.0	29.976976	45
TTACTCG	135	1.72804E-10	29.545017	57
GCGGCAC	2155	0.0	29.258957	33
CCCGTCG	2115	0.0	28.619228	44
TCGCCGG	2160	0.0	28.59423	48
TCGATCG	1190	0.0	28.386833	6
AACGGCG	1395	0.0	28.057213	49
GGAAACG	985	0.0	27.844872	37