EGAF00005319099 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319099
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3314764
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	38775	1.1697665354154927	No Hit
GGGCGGGGGGCCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC	14178	0.42772275793993175	No Hit
GGCCGGGGGGCCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC	9645	0.2909709409176641	No Hit
CGGCGGGGGGCCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC	6246	0.18842970419613583	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4581	0.13819988391330423	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4551	0.13729484210640638	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4310	0.1300243395909935	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1265	54.682636	4
TCTACGG	1270	54.467354	5
TACGGCC	1275	54.252098	7
CTACGGC	1310	52.79939	6
GCGTACA	330	47.90425	1
CGGTATT	525	47.40919	1
ACGGCCA	1475	47.12243	8
TGGCGCG	3195	46.64308	15
CGGCATA	305	45.214127	1
CGGTATA	385	43.68169	1
GCGTATA	325	43.46664	1
GCGCGGT	3485	43.436195	9
CGGCCAT	1625	42.978302	9
CCGAACT	515	42.651886	67
CGGTACT	255	42.2085	1
GGTCTAC	1375	42.044872	3
ATCGCCC	6920	42.00633	57
TGCGGCG	6690	41.98482	68
TGGATCG	6980	41.516407	54
ACGCGAG	6850	41.38346	33