EGAF00005319101 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319101
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3278906
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	38304	1.168194513657909	No Hit
GGGCGGGGGGCCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC	13710	0.41812726561847147	No Hit
GGCCGGGGGGCCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC	9175	0.2798189396097357	No Hit
CGGCGGGGGGCCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTC	5880	0.1793281051667843	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4530	0.13815583612338994	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4521	0.1378813543297673	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4148	0.1265056088829628	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1035	57.884415	4
TACGGCC	1040	57.61324	7
TCTACGG	1065	56.261684	5
CTACGGC	1090	54.664177	6
ACGGCCA	1295	46.527035	8
CGGTATA	330	44.978794	1
CGGTATT	370	42.851418	1
CGGTACT	300	42.729855	1
GCCATAC	1400	42.559307	11
TGGCGCG	3100	42.5406	15
CGGCCAT	1430	41.899895	9
GCGCGGT	3155	41.589394	9
ACGCGAG	6765	41.586784	33
TGGATCG	6965	41.529182	54
ATCGCCC	6995	41.283123	57
GCGTACT	280	40.96283	1
TGGACGC	6925	40.75324	30
GACGCGA	6930	40.665585	32
TGCGGCG	6855	40.601913	68
GCGTATT	375	40.48091	1