EGAF00005319103 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319103
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3710582
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13901	0.37463125730680524	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12632	0.3404317705416563	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8031	0.2164350498115929	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7490	0.2018551267698706	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6442	0.17361157899219046	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4649	0.1252903183382014	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1555	58.613018	4
TCTACGG	1585	56.847687	5
TACGGCC	1600	56.314743	7
CTACGGC	1710	52.692154	6
GCGCGGT	7010	52.30418	9
GCCGGTT	1180	49.62932	3
CCGAACT	1150	49.321316	67
TGGCGCG	7590	48.713623	15
CGAACTT	1225	48.00198	68
CGCGGTG	7735	47.71534	10
CGGTTCA	1260	46.75705	5
ACGGCCA	1970	46.265606	8
CCGGTTC	1295	45.493347	4
GCCATAC	2020	44.42579	11
CGTGCCT	8400	43.90846	20
CGGCCAT	2145	42.975716	9
GCGTGCC	8705	42.603783	19
CTACTCG	8740	42.41831	37
TACTCGG	8790	42.222828	38
GTAGTCC	8800	41.944866	27