EGAF00005319105 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319105
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3694910
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13845	0.37470466127727065	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12857	0.34796517371194424	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7901	0.21383470774660276	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7304	0.19767734532099562	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6261	0.16944932352885456	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4570	0.12368366211896907	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	1745	57.000687	7
GTCTACG	1740	56.968388	4
TCTACGG	1755	56.283993	5
CTACGGC	1885	52.585495	6
GCGCGGT	6900	51.53168	9
CCGAACT	1000	48.269207	67
CGGCCAT	2050	48.180023	9
TGGCGCG	7585	47.10695	15
CGCGGTG	7600	46.92214	10
ACGGCCA	2140	46.639587	8
GCCATAC	2155	46.154133	11
CGGTTCA	1075	46.104652	5
CGAACTT	1110	44.578156	68
GCCGGTT	1115	43.828987	3
CGGTCTA	410	43.12596	2
CATACCA	2305	42.850494	13
GGGTCTA	1795	42.492344	2
GAACGCG	2340	42.389812	24
CCATACC	2365	42.348957	12
CGTGCCT	8380	42.19448	20