EGAF00005319109 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319109
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3704420
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13259	0.35792377754142346	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12074	0.325934964177928	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7091	0.1914199793759887	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7057	0.19050215688285888	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6141	0.16577493912677288	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4307	0.11626651405618155	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	1695	57.477127	5
GTCTACG	1715	57.204975	4
TACGGCC	1735	56.35107	7
CTACGGC	1835	53.280888	6
GCGCGGT	7225	53.26448	9
CCGAACT	1140	50.628456	67
CGCGGTG	7805	49.350742	10
TGGCGCG	7885	48.801453	15
CGAACTT	1230	47.971954	68
GCCGGTT	1235	47.15783	3
CGGTTCA	1230	47.072773	5
ACGGCCA	2095	46.833324	8
CGTGCCT	8785	43.614	20
CGGCCAT	2280	42.72913	9
GTAGTCC	9025	42.591885	27
CTACTCG	8995	42.56583	37
TACTCGG	9040	42.39697	38
GAACGCG	2255	42.299225	24
GCGTCTA	485	42.189434	2
GCGTGCC	9120	42.163456	19