EGAF00005319119 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319119
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3344436
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	31167	0.9319060074703178	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	13880	0.4150176591808006	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8221	0.24581125188223069	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	6990	0.20900384997649826	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6479	0.19372474163057687	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3832	0.11457836239054957	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3626	0.10841887839982585	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2995	62.173927	5
TACGGCC	3045	60.82126	7
GTCTACG	3080	60.458096	4
CTACGGC	3165	58.940807	6
ACGGCCA	3460	53.720863	8
CGGCCAT	3505	52.839012	9
GCCATAC	3600	51.15554	11
GGGTCTA	2655	51.10864	2
GCGCGGT	4510	50.3973	9
CCATACC	3720	49.690872	12
TGGCGCG	4555	49.304287	15
CATACCA	3845	48.163002	13
CCTGGTT	5360	47.487682	70
GGCCATA	3930	47.29623	10
CGTCTAC	800	46.717567	3
TACCACC	3960	46.679306	15
CTGAACG	3910	46.428196	22
TGAACGC	3950	45.756733	23
GAACGCG	3920	45.73141	24
CCGAACT	640	44.262596	67