EGAF00005319120 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319120
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3328087
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	31252	0.939037951832389	No Hit
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	18398	0.5528100677656564	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	6970	0.20942962128093406	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	5696	0.17114937199658542	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	5404	0.16237556289844587	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4704	0.14134245889605648	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	4464	0.13413110895238015	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	4307	0.12941368419755853	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1820	45.203392	70
CGCGGCA	5675	36.564693	32
GCGGCAC	5810	35.950077	33
CGGCACC	5915	35.022793	34
TCGCCGG	5730	34.35458	48
CCGTCGC	5805	33.723843	45
CCCGTCG	5905	33.337242	44
TTCGTTG	500	33.024208	31
GATTTCG	325	32.64737	28
ACCCGCG	6465	31.716429	25
ATGGCCG	2000	31.478645	69
GCACCCC	6665	31.392628	36
CCCCCGA	6505	31.315882	19
CGTTGGA	510	31.139256	33
GTTCCGT	290	30.412155	1
CACCCCC	6865	30.326668	37
GGCACCC	6945	29.97264	35
ATTTCGT	360	29.522999	29
TATCGGA	240	29.433405	8
CCCCGAC	7005	29.213587	20