EGAF00005319121 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319121
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3328087
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	31010	0.9317665073058488	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	13958	0.4194000938076438	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8240	0.24758968139955476	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	6961	0.2091591956580462	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6659	0.20008491364558678	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3832	0.11514122076736577	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3591	0.10789982353225742	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	3070	62.65271	5
GTCTACG	3085	62.23908	4
TACGGCC	3125	61.976677	7
CTACGGC	3195	60.20151	6
ACGGCCA	3530	55.15013	8
GCCATAC	3545	54.727077	11
CGGCCAT	3590	54.228397	9
CCATACC	3745	51.624054	12
GGCCATA	3840	50.873028	10
CCTGGTT	5375	50.071472	70
CATACCA	3910	49.445545	13
GGGTCTA	2845	49.419106	2
GCGCGGT	4140	49.05455	9
CCGAACT	695	48.740776	67
GAACGCG	3870	48.228912	24
TACCACC	4035	47.997105	15
GCGTCTA	735	47.135784	2
CGTCTAC	825	46.873363	3
CTGAACG	4025	46.324646	22
TGAACGC	4040	46.21557	23