EGAF00005319123 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319123
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3333990
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	31185	0.9353657329506087	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	14172	0.42507625997678455	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8309	0.24922090348201403	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6761	0.20279005036007908	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	6740	0.20216017444563422	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3865	0.11592716234901723	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3667	0.10998833229853718	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2980	61.287006	5
TACGGCC	3015	60.46399	7
GTCTACG	3025	60.264114	4
CTACGGC	3060	59.572113	6
ACGGCCA	3295	55.428	8
CGGCCAT	3310	55.176823	9
GCCATAC	3480	52.385544	11
CATACCA	3595	50.99047	13
CCATACC	3585	50.94506	12
GCGCGGT	4525	50.916298	9
TGGCGCG	4580	50.303333	15
GGGTCTA	2875	49.60656	2
CCTGGTT	5275	49.06695	70
GGCCATA	3765	48.59804	10
CTGAACG	3780	47.300655	22
GAACGCG	3790	46.758694	24
CCGAACT	640	46.603157	67
TACCACC	3940	46.523453	15
TGAACGC	3875	46.10275	23
CGGTATA	235	46.10093	1