EGAF00005319125 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319125
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3309245
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	30848	0.932176372556278	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	13698	0.4139312743541201	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8009	0.24201894994175407	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	6507	0.1966309535860899	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6389	0.19306518556347446	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3571	0.10790981024372628	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3478	0.10509950154793615	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2805	62.158928	5
GTCTACG	2830	61.715572	4
TACGGCC	2835	61.61989	7
CTACGGC	2860	61.316635	6
CGGTATA	235	57.733196	1
ACGGCCA	3180	55.14641	8
GCCATAC	3250	53.4408	11
CGGCCAT	3275	53.341187	9
CCATACC	3550	49.389713	12
CGTCTAC	850	49.092663	3
GGCCATA	3575	48.95916	10
CATACCA	3590	48.839405	13
GGGTCTA	2485	48.76214	2
CCTGGTT	5115	48.102398	70
GCGCGGT	4250	47.835976	9
TACCACC	3650	47.574112	15
GCGTCTA	715	46.60535	2
GCGTACT	220	46.252155	1
TGAACGC	3680	46.041267	23
TGGCGCG	4450	45.82753	15