EGAF00005319147 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319147
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5081743
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	62

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	31267	0.6152810167692463	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	29357	0.577695487552204	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	23798	0.4683038870718177	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	16310	0.32095286991097344	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	15733	0.309598497995668	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11915	0.23446679613667987	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	8477	0.16681284354600381	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	7803	0.15354967773852396	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6893	0.13564243606967138	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6883	0.13544565319418947	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6608	0.13003412411843732	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6472	0.12735787701188353	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	6161	0.12123792958439654	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6027	0.1186010390529391	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	4995	61.76308	4
TCTACGG	5010	61.71561	5
TACGGCC	5010	61.52979	7
CTACGGC	5190	59.51619	6
CGGTTCA	2255	56.092667	5
ACGGCCA	5565	55.578243	8
CGGCCAT	5590	55.26835	9
GCCATAC	5570	55.220547	11
GGGTCTA	4155	54.782864	2
GCCGGTT	2285	54.6056	3
GGCCATA	5720	54.072193	10
GCGCGGT	15765	54.02827	9
CCGAACT	2370	53.84383	67
CATACCA	5760	53.278397	13
CCATACC	5795	53.075996	12
CGCGGTG	16555	51.429348	10
CGGTCTA	615	50.724056	2
TGGCGCG	16980	50.40789	15
CCTGGTT	8320	50.301464	70
CCGGTTC	2535	49.89653	4