EGAF00005319149 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319149
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5011356
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	62

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	30847	0.6155419810526332	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	28931	0.5773088162166089	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	23242	0.4637866477655948	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	15998	0.319234953573444	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	15758	0.31444583062947434	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11805	0.23556498480650748	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	8352	0.16666147845014403	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	7536	0.1503784604406472	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6709	0.1338759409628851	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6606	0.1318206090327648	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6545	0.13060337361783916	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6472	0.12914668205571506	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	5984	0.11940879873631009	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5852	0.11677478111712677	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	5120	63.332848	4
TCTACGG	5170	62.658436	5
TACGGCC	5320	61.08506	7
CTACGGC	5390	60.291744	6
GGGTCTA	4115	57.05958	2
GCCATAC	5735	55.827957	11
ACGGCCA	5795	55.66401	8
CGGCCAT	5835	55.047424	9
CGGTTCA	2390	54.646873	5
CCGAACT	2435	54.641056	67
GCGCGGT	15500	54.383244	9
GCCGGTT	2400	53.844078	3
CCATACC	5960	53.833237	12
GGCCATA	6065	52.959885	10
CATACCA	6060	52.831768	13
GCGTCTA	1185	52.645454	2
CGCGGTG	16290	51.766914	10
CGAACTT	2640	51.443314	68
TGGCGCG	16585	50.63893	15
CCTGGTT	8605	50.279556	70