EGAF00005319158 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319158
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3640542
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	17436	0.4789396743671684	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	7689	0.21120481510720107	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4989	0.13704003414876137	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	4302	0.11816921766044726	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	5200	37.21125	32
TATCGGA	200	36.3064	8
GCGGCAC	5405	35.934166	33
TCGCCGG	5260	34.598034	48
CCCGTCG	5400	34.031345	44
CCGTCGC	5455	33.637917	45
CGGCACC	5755	33.63473	34
CACCCCC	6355	30.48395	37
GCACCCC	6385	30.439806	36
GTTCCGT	320	30.35255	1
TTATCGG	255	29.831589	7
CCCCCGA	6685	29.177574	19
GGCACCC	6825	28.625996	35
ACCCGCG	6855	28.578072	25
CGTAGCG	465	28.255346	9
AGGAGGG	9415	27.84151	70
CGTCGCC	6705	27.482899	46
GTTATCG	265	27.401058	6
GGCGATC	1110	27.040215	70
CGCCCTA	1315	26.995909	61