EGAF00005319169 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319169
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3356924
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	25101	0.7477381078630317	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	16352	0.48711260666014483	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	14863	0.4427565235316617	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	14680	0.43730510431573666	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7052	0.2100732694573961	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7049	0.20998390192926622	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	5658	0.1685471580530271	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4689	0.1396814464670633	No Hit
GGCCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3810	0.11349676072499705	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	4890	64.005066	4
TCTACGG	4980	62.98693	5
TACGGCC	5020	62.4163	7
CTACGGC	5200	60.322094	6
ACGGCCA	5335	58.795673	8
GGGTCTA	4055	57.959408	2
CGGCCAT	5490	57.198544	9
GCCATAC	5450	56.91677	11
CCTGGTT	7945	56.660088	70
CCATACC	5675	54.781757	12
GGCCATA	5745	54.474632	10
GCGTCTA	910	54.232838	2
GCGCGGT	7545	53.968292	9
CATACCA	5770	53.700405	13
CCGAACT	1190	51.50419	67
CGCGGTG	7885	51.46153	10
CGTCTAC	1060	51.435993	3
TGGCGCG	8030	50.3634	15
TACCACC	6085	50.24306	15
CTGAACG	6220	49.73774	22