EGAF00005319170 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319170
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3446388
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	10193	0.29575892209466836	No Hit
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	10134	0.29404698484326197	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8046	0.23346181567484567	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	7845	0.22762962266581707	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	4815	0.13971148924613247	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4740	0.13753529782485316	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4683	0.13588139234468086	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	4127	0.11974855994159683	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	3902	0.11321998567775884	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	3591	0.10419604525085394	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2275	44.610725	70
CGCGGCA	3115	36.22231	32
GCGGCAC	3280	34.830353	33
CGGCACC	3435	33.16659	34
TCGCCGG	3305	32.35799	48
CTTACCC	1590	31.589243	70
CCGTCGC	3385	31.331871	45
ATGGCCG	2530	31.160574	69
CCCGTCG	3430	31.003136	44
ACCCGCG	3905	29.115318	25
AGTCCGC	3930	28.713743	7
CAGTCCG	3860	28.51924	6
CCCCCGA	3925	28.49897	19
GTTCCGT	445	27.957724	1
CCCCCGT	3820	27.901943	42
GCACCCC	4185	27.65864	36
GATAGGC	3255	27.395645	40
CCCCGAC	4170	27.078451	20
CATTAGC	3295	27.020842	13
GCTAACC	755	26.96822	5