EGAF00005319172 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319172
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3417068
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	9871	0.2888733850189695	No Hit
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	9518	0.27854289115698017	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	7915	0.23163132837859826	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	7713	0.2257198276417092	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4692	0.13731070028457146	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4649	0.13605231151384753	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	4612	0.13496951187392234	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	3996	0.11694236111192402	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	3860	0.1129623408138205	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2305	46.39003	70
GACGTAT	400	34.762665	44
CGCGGCA	2960	33.572533	32
GTTCCGT	445	32.650356	1
ATGGCCG	2600	32.547405	69
ACGTATC	430	32.351196	45
GCGGCAC	3085	32.220734	33
CGGATAG	460	30.886198	35
CTTACCC	1595	30.76721	70
CGGCACC	3220	30.661951	34
GGACGTA	455	30.544373	43
CCGTCGC	3100	30.177925	45
TCGCCGG	3170	29.675526	48
TCGGATA	485	29.28552	34
CCCGTCG	3330	28.185944	44
CGTATCA	490	27.69356	46
GTCCGTT	265	27.360985	2
CGCCCTA	920	27.198267	61
AGGACCG	630	27.058182	70
ACCCGCG	3725	27.00437	25