EGAF00005319187 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319187
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3719292
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	16257	0.4370993189026298	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	15841	0.4259143944600209	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	14974	0.4026035062587181	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11870	0.3191467623407896	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7820	0.21025507005096672	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4472	0.12023793775804642	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4345	0.11682330938253839	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3305	62.512436	4
TCTACGG	3345	61.86802	5
TACGGCC	3390	61.045944	7
CTACGGC	3515	58.873444	6
ACGGCCA	3835	53.962383	8
GCCATAC	3840	53.8023	11
GCGCGGT	8020	53.800728	9
CGGCCAT	3885	53.267883	9
GGGTCTA	3000	52.542633	2
CCGAACT	1285	51.423637	67
TGGCGCG	8435	51.23415	15
CCATACC	4105	50.41309	12
CCTGGTT	5960	49.698666	70
CATACCA	4165	49.68685	13
GCCGGTT	1320	49.64741	3
CGCGGTG	8805	49.23922	10
GGCCATA	4205	49.214207	10
GCGTCTA	810	48.96996	2
CCGGTTC	1365	48.26272	4
CGGTTCA	1370	47.583054	5