EGAF00005319189 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319189
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3709238
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	15494	0.4177138269369612	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	15404	0.41528745257112104	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	13971	0.3766541807239115	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11239	0.3030002388630765	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7493	0.2020091458137763	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4465	0.12037512826084495	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4327	0.1166546875665568	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3120	62.68654	4
TCTACGG	3175	61.824596	5
TACGGCC	3195	61.004864	7
CTACGGC	3375	57.956486	6
GCCATAC	3485	55.92842	11
CGGCCAT	3605	54.066727	9
ACGGCCA	3635	53.90522	8
CCATACC	3630	53.8808	12
GCGCGGT	7970	53.84544	9
GGGTCTA	2895	51.842533	2
CATACCA	3785	51.40091	13
GGCCATA	3840	50.84779	10
TGGCGCG	8425	50.687683	15
CGCGGTG	8580	49.936855	10
CCGAACT	1365	49.454174	67
GCCGGTT	1435	49.2774	3
CGAACTT	1435	48.66228	68
TACCACC	4085	47.709854	15
CGGTTCA	1510	47.291832	5
CCTGGTT	5825	47.235634	70