EGAF00005319206 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319206
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3542214
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	18720	0.5284830334926123	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	11199	0.31615819936344897	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8179	0.23090078690897842	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	8111	0.22898108358218897	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	8039	0.22694845653029433	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	6490	0.18321874398328278	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4990	0.14087234706881063	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4834	0.13646832178970555	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	4568	0.1289588940702058	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	4536	0.12805550426936374	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	4084	0.11529512333246945	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	3743	0.10566837576724614	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	3565	0.10064327000006211	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	3543	0.10002218951198319	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	5955	37.99053	32
GCGGCAC	6245	36.24391	33
TCGCCGG	6120	35.5312	48
CGGCACC	6435	35.192825	34
CCCGTCG	6240	34.705097	44
CCGTCGC	6280	34.33862	45
TGGCCGT	1405	32.729183	70
CCCCCGA	6945	32.64129	19
ACCCGCG	6985	32.571503	25
CCCCGAC	7150	31.7644	20
GCACCCC	6455	31.407066	36
CCCCCGT	7025	30.595995	42
GGCACCC	6630	30.51352	35
CCGCGCG	7485	30.467354	27
GTTCCGT	410	29.498764	1
GCGCGGG	7745	28.46688	62
CCCGCGC	8065	28.219	26
TCAGGAT	2025	27.948793	70
CACCCCC	7350	27.694916	37
CGTCGCC	7880	27.4734	46