EGAF00005319210 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319210
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3520613
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	18710	0.5314415415724477	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	11189	0.31781397160096836	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	8240	0.23405014978925545	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8140	0.23120973535006545	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7701	0.21874031596202137	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	6223	0.1767589905507933	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	5056	0.14361135404544606	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4867	0.13824297075537698	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	4484	0.1273641834532793	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	4247	0.120632401232399	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	4055	0.11517880550915424	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	3880	0.11020808024057174	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	3662	0.10401597676313755	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	3588	0.10191407007813695	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	6240	38.311764	32
TGGCCGT	1430	38.161312	70
GCGGCAC	6465	36.83399	33
CGGCACC	6640	36.034283	34
TCGCCGG	6385	35.027634	48
CCCGTCG	6505	34.678345	44
CCGTCGC	6495	34.637356	45
TAGTCCG	315	33.874935	6
ACCCGCG	7170	33.368866	25
CCCCCGA	7225	33.29104	19
CCCCGAC	7375	32.57742	20
GCACCCC	6605	32.374554	36
GTTCCGT	325	31.889252	1
CCGCGCG	7595	31.393028	27
GGCACCC	6900	30.820034	35
CCCCCGT	7355	30.540176	42
CACCCCC	7340	29.050613	37
CCCGCGC	8400	28.779863	26
ATGGCCG	1535	28.779858	69
GCGCGGG	7970	28.568531	62