EGAF00005319215 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319215
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4980290
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	19807	0.3977077640057105	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	14903	0.29923960251310666	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12740	0.2558083966997906	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7703	0.1546697079888922	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7262	0.1458148019492841	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5957	0.1196115085667702	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4987	0.10013473111003576	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	4465	62.43109	4
TCTACGG	4455	62.33862	5
TACGGCC	4450	61.86406	7
CTACGGC	4630	60.13162	6
ACGGCCA	4910	55.997894	8
CGGCCAT	4970	55.25403	9
GCCATAC	5085	54.007687	11
GCGCGGT	8135	52.56737	9
GGGTCTA	3805	51.755478	2
CCATACC	5420	50.79755	12
GCGTCTA	1095	50.48263	2
CATACCA	5550	49.85667	13
CCTGGTT	7915	49.177486	70
GGCCATA	5610	49.012604	10
TGGCGCG	8960	48.116093	15
CTGAACG	5770	48.05954	22
GGTCTAC	4595	47.81739	3
CGCGGTG	9015	47.4748	10
GCCGGTT	1260	47.43401	3
CGTCTAC	1315	47.289097	3