EGAF00005319219 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319219
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5161145
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	20724	0.4015388058270015	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	16152	0.312953811605758	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	13792	0.26722752412497613	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8439	0.16351022883488062	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7620	0.1476416570354059	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6171	0.11956649154402754	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	5335	0.10336853547032684	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	4545	61.88937	7
GTCTACG	4580	61.478153	4
TCTACGG	4600	61.362263	5
CTACGGC	4645	60.62315	6
ACGGCCA	5005	56.270283	8
GCCATAC	5175	53.687263	11
CGGCCAT	5290	52.977413	9
GCGCGGT	8320	52.91413	9
GCGTCTA	1070	50.694565	2
GGGTCTA	4160	50.66197	2
CCTGGTT	7790	50.516953	70
CCATACC	5505	50.342434	12
CATACCA	5660	48.778748	13
TGGCGCG	8990	48.766567	15
GGCCATA	5795	48.360744	10
GGTCTAC	4735	47.791428	3
CGTCTAC	1215	47.77071	3
CGCGGTG	9245	47.69461	10
CTGAACG	5850	47.22837	22
GAACGCG	5870	47.079792	24