EGAF00005319220 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319220
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5092432
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	20506	0.4026759709309815	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	8996	0.17665429798571683	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	6170	0.12116018436770487	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	5845	0.11477816493180469	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5487	0.10774812506087465	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2405	45.105793	70
CGCGGCA	6320	37.117218	32
ATGGCCG	2315	36.789074	69
GCGGCAC	6595	35.78882	33
CGGCACC	6945	33.692085	34
TCGCCGG	6560	33.664047	48
CCGTCGC	6610	33.415783	45
CCCGTCG	6685	33.23719	44
CCCCCGA	7815	30.616379	19
ACCCGCG	7865	30.007776	25
GCACCCC	7890	29.845991	36
GTTCCGT	705	29.470829	1
CGTACGT	270	29.453764	19
CACCCCC	8050	29.34762	37
AGGACCG	975	29.251707	70
CCCCGAC	8560	27.79346	20
CGGATAG	575	27.738615	35
AGTCCGC	8610	27.502918	7
GGACGTA	560	27.311647	43
GGCACCC	8590	27.286531	35