EGAF00005319230 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319230
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3761781
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	14419	0.38330248358423846	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	8329	0.2214110816126723	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	6803	0.18084519008416494	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	6654	0.17688430028223331	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	5984	0.15907358775005775	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	3979	0.10577436591869649	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1755	48.278038	70
CGCGGCA	4600	35.046467	32
ATGGCCG	1995	33.742428	69
AGGACCG	575	33.329838	70
GCGGCAC	4850	33.178642	33
TCGCCGG	4600	32.35031	48
CGGCACC	5005	32.019814	34
CCGTCGC	4725	31.455679	45
CCCGTCG	4775	31.33156	44
GTGCCGT	555	29.370438	1
GTTCCGT	325	28.812832	1
GCACCCC	5640	28.667646	36
GACGTAT	340	28.652733	44
CCCCCGA	5680	28.557146	19
ACCCGCG	5705	27.788452	25
CACCCCC	5810	27.719387	37
CTTACCC	1165	27.705854	70
GTCCGTT	190	27.295025	2
AGTCCGC	6020	27.279913	7
CAGTCCG	5855	27.16294	6