EGAF00005319232 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319232
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3782431
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	15483	0.4093399192212627	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	8392	0.22186789395497236	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	7073	0.18699614084169677	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	6877	0.18181428821834425	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	5827	0.15405436345038415	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4050	0.1070739955335603	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	3950	0.10443019317470696	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1500	41.55312	70
CGCGGCA	4825	36.068905	32
TCGCCGG	4760	34.779484	48
GCGGCAC	5080	34.469032	33
CCCGTCG	4855	34.33253	44
CCGTCGC	4840	34.092606	45
CGGCACC	5200	33.82041	34
GCACCCC	5760	30.544882	36
AGGACCG	555	29.887815	70
TAGTCCG	430	29.757833	6
CACCCCC	5925	29.644745	37
CCCCCGA	5975	29.591278	19
ATGGCCG	1635	29.467592	69
ACCCGCG	6010	29.322824	25
GGCACCC	6180	28.462591	35
AGTCCGC	6770	26.308277	7
CGTCGCC	6390	25.996704	46
CGCCCTA	1215	25.746216	61
CCCCGAC	6855	25.743431	20
GTCCGCC	6980	25.566315	8