EGAF00005319233 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319233
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3782431
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	16518	0.4367032736353948	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13909	0.36772647009291115	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11431	0.30221304764052537	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	10514	0.27796938000984023	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6027	0.15934196816809082	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5227	0.1381915492972641	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4399	0.11630086576595844	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3000	62.351868	4
TCTACGG	3010	61.685246	5
TACGGCC	3040	61.076504	7
CTACGGC	3115	59.605965	6
ACGGCCA	3430	54.23275	8
CGGCCAT	3490	53.10224	9
GCCATAC	3520	52.448357	11
GCGCGGT	6335	51.577305	9
GGGTCTA	2710	50.277664	2
GGCCATA	3765	49.310856	10
CCATACC	3780	48.93225	12
CCGAACT	995	48.808155	67
GCGTCTA	730	48.793568	2
CCTGGTT	5445	48.422604	70
CATACCA	3860	48.276386	13
GCCGGTT	1045	47.645256	3
CTGAACG	3880	47.440205	22
TGAACGC	3910	47.35108	23
GAACGCG	3905	47.328102	24
TGGCGCG	6955	46.87943	15