EGAF00005319234 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319234
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3889265
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	16014	0.41174874944237533	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	8533	0.21939878100360866	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	7564	0.1944840477570955	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	6996	0.17987974591600212	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	5996	0.1541679468999927	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4296	0.11045788857277661	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4123	0.10600974734300697	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1790	41.362694	70
CGCGGCA	4840	34.52462	32
GCGGCAC	5040	33.16272	33
CGGCACC	5160	32.334305	34
TCGCCGG	4870	32.206383	48
CCCGTCG	4930	32.10961	44
CCGTCGC	4920	31.973495	45
ATGGCCG	1815	31.736185	69
TTATCGG	215	30.552778	7
GCACCCC	5710	29.35455	36
CCCCCGA	5865	28.657108	19
GTTCCGT	395	28.052437	1
ACCCGCG	6050	28.037966	25
CACCCCC	6120	27.398956	37
GTGCCGT	520	27.302237	1
GTCCGTT	295	26.96033	2
GATAGGC	2865	26.681631	40
GGCACCC	6365	26.490498	35
AGTCCGC	6585	26.251238	7
CAGTCCG	6365	26.235195	6