EGAF00005319236 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319236
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3848437
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	15405	0.40029237843831145	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	8540	0.22190827081228043	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	7475	0.1942346983983368	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	6908	0.1795014443526034	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	5832	0.15154204161325754	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	3991	0.10370443897093806	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	3989	0.10365246982086493	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1730	40.75836	70
CGCGGCA	4660	36.831768	32
GCGGCAC	4880	35.178204	33
TCGCCGG	4725	33.93098	48
CCCGTCG	4725	33.789013	44
CGGCACC	5120	33.336018	34
CCGTCGC	4830	32.854332	45
GCACCCC	5655	30.686192	36
CCCCCGA	5715	30.567923	19
ACCCGCG	5810	29.97671	25
ATGGCCG	1870	29.646404	69
CACCCCC	5895	29.268665	37
GGCACCC	5850	29.243069	35
AGTCCGC	6370	27.743372	7
CAGTCCG	6215	27.600586	6
GTTCCGT	365	27.524399	1
AGGACCG	625	27.39894	70
GTCCGTT	365	26.527245	2
CCCCGAC	6560	26.475338	20
TCCGCCC	6900	26.414312	9