EGAF00005319243 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319243
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3726404
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	14110	0.37864922858605776	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13620	0.3654998223488382	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11196	0.3004505147590009	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	11050	0.29653252841076816	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8414	0.22579408995911343	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5539	0.14864196152644749	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5435	0.14585106714140497	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4280	0.1148560381536731	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2475	59.412857	5
TACGGCC	2470	59.406353	7
GTCTACG	2510	58.856716	4
CTACGGC	2625	56.024624	6
CCGAACT	895	54.030113	67
GCCATAC	2790	52.46843	11
ACGGCCA	2845	51.816998	8
GGGTCTA	2225	50.067013	2
GCGCGGT	6595	49.177044	9
CGGCCAT	3015	49.00902	9
GCCGGTT	1025	48.486958	3
GGCCATA	3045	48.188408	10
CCATACC	3090	47.484715	12
CATACCA	3075	47.267853	13
TGGCGCG	7065	46.23276	15
GCGTCTA	595	45.51017	2
CGCGGTG	7420	44.171288	10
TACCACC	3275	44.164185	15
CGGTTCA	1105	44.047817	5
CGAACTT	1125	44.03998	68