EGAF00005319259 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319259
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3784538
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	15452	0.40829290127355045	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13981	0.3694242203407655	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11674	0.30846565683843047	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11173	0.29522758127940585	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7023	0.18557086756692626	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5653	0.1493709403895535	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4576	0.12091304143332687	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	3150	62.242928	5
GTCTACG	3145	62.231934	4
TACGGCC	3225	60.688194	7
CTACGGC	3275	59.758503	6
ACGGCCA	3510	56.056076	8
CGGCCAT	3575	54.746693	9
GCCATAC	3590	54.03634	11
GCGCGGT	6740	52.895206	9
CCATACC	3760	51.685173	12
CGTCTAC	840	51.457455	3
CCGAACT	1135	50.878117	67
CATACCA	3830	50.830822	13
GGCCATA	3895	50.160114	10
GGGTCTA	2760	49.864506	2
CGGTTCA	1165	49.56876	5
GAACGCG	3945	49.134834	24
GCGTCTA	775	49.08045	2
CCTGGTT	5475	49.025635	70
TGAACGC	4005	48.39169	23
TGGCGCG	7405	48.049057	15