EGAF00005319261 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319261
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3783035
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	14964	0.3955554204494539	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13755	0.3635969532399251	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11316	0.2991249089685927	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	10624	0.280832717646017	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6942	0.18350345688052053	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5426	0.14342981230678542	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4333	0.11453766618601204	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	3140	61.778618	7
TCTACGG	3170	60.978226	5
GTCTACG	3180	60.89037	4
CTACGGC	3385	57.309467	6
GCCATAC	3605	54.193623	11
CCGAACT	1200	54.056988	67
ACGGCCA	3615	54.04371	8
CGGCCAT	3655	53.642178	9
GGGTCTA	2745	52.161392	2
CCATACC	3795	51.569435	12
GCGCGGT	6610	51.214382	9
CGGTTCA	1295	50.467785	5
CATACCA	3885	50.37478	13
GGCCATA	3965	49.70918	10
CCTGGTT	5605	48.692787	70
TACCACC	4020	48.423122	15
GAACGCG	4035	48.207184	24
TGGCGCG	7055	48.12657	15
GCGTCTA	755	48.098717	2
TGAACGC	4070	47.95381	23