EGAF00005319267 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319267
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3529060
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	14045	0.39798133213943654	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10046	0.2846650382821488	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8077	0.2288711441573677	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7134	0.2021501476313806	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5763	0.1633012756938108	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4623	0.13099805613959523	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3783	0.10719568383648903	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3540	0.10030999756309045	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2665	61.966843	5
GTCTACG	2715	61.080147	4
TACGGCC	2710	60.80952	7
CTACGGC	2810	58.768433	6
ACGGCCA	2950	56.096535	8
GCCATAC	3040	54.208492	11
CGGCCAT	3120	53.03999	9
GCGCGGT	4930	52.1373	9
GGCCATA	3220	51.60737	10
GGGTCTA	2460	51.543266	2
CCATACC	3275	50.42421	12
CCTGGTT	4660	50.030373	70
CATACCA	3425	48.41759	13
GAACGCG	3400	47.918205	24
TGGCGCG	5400	47.72738	15
ATCTCGT	3510	47.128223	35
CTGAACG	3510	46.497887	22
CCCGATC	3540	46.187733	31
CGCGGTG	5585	46.146435	10
TGAACGC	3555	45.82049	23