EGAF00005319269 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319269
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3533014
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	13556	0.3836950547040006	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9820	0.2779496486569258	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7813	0.22114262779598381	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	6829	0.19329105404054442	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5629	0.1593257201924476	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4495	0.12722847970599607	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3768	0.10665114828302406	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2765	62.239487	5
TACGGCC	2790	61.804775	7
GTCTACG	2840	60.710636	4
CTACGGC	2930	58.734535	6
ACGGCCA	3200	54.317986	8
CGGCCAT	3215	54.063793	9
GCCATAC	3205	53.585567	11
CCATACC	3340	51.625145	12
GGGTCTA	2595	51.27849	2
CCTGGTT	4710	51.217678	70
CATACCA	3450	50.279602	13
GCGCGGT	4685	50.15553	9
GGCCATA	3455	50.108242	10
GAACGCG	3435	49.94654	24
TGAACGC	3505	49.235325	23
CCCGATC	3505	49.12507	31
CTGAACG	3560	48.759182	22
GCGTCTA	670	48.491417	2
ATCTCGT	3520	48.37536	35
GCCCGAT	3570	48.21967	30