EGAF00005319270 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319270
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2555930
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	6409	0.25075021616397947	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	4078	0.1595505354215491	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	3535	0.1383058221469289	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	3126	0.12230381896217815	No Hit
CGTTTGAATATTTGCTACTACCACCAAGATCTGCACCTGCGGCGGCTCCACCCGGGCCCGCGCCCTAGGCTTCA	3087	0.12077795557781316	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	3027	0.11843047344802088	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	2665	0.10426733126494075	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1120	42.49011	70
AGGACCG	490	34.83661	70
CGCGGCA	1970	33.594837	32
GCGGCAC	2035	32.36104	33
CCCGTCG	1880	31.622402	44
CGGCACC	2080	31.162846	34
CCGTCGC	1910	30.951614	45
TCGCCGG	1895	30.876417	48
ATGGCCG	1235	29.467419	69
GTTCCGT	190	29.196281	1
GATAGGC	1370	27.622587	40
CCCCCGA	2450	26.672562	19
ACCCGCG	2475	26.561043	25
TCGCCGT	185	26.2372	1
GCACCCC	2555	26.058428	36
CAGTCCG	2505	25.664818	6
AGTCCGC	2580	25.588604	7
AACGGCG	495	25.33785	49
CACCCCC	2680	24.853266	37
CGGAACG	505	24.804302	46