EGAF00005319271 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319271
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2555930
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	12211	0.47775173811489363	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7164	0.280289366297199	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6179	0.24175153466644236	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5614	0.21964607794423166	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3306	0.129346265351555	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3039	0.11889996987397933	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	2790	0.10915791903534135	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2345	62.340733	5
GTCTACG	2340	62.326244	4
TACGGCC	2340	61.883167	7
CTACGGC	2420	60.265873	6
ACGGCCA	2565	56.589558	8
CGGCCAT	2660	54.70057	9
GCGTCTA	475	53.850407	2
CCTGGTT	3875	53.461624	70
GCCATAC	2700	53.127357	11
CCATACC	2800	51.60029	12
GCGCGGT	3160	51.51399	9
GGGTCTA	2145	51.244907	2
CTGAACG	2840	50.7896	22
GAACGCG	2830	50.36977	24
CGGTCTA	345	50.09586	2
CATACCA	2895	50.02641	13
TGAACGC	2870	49.66386	23
GGCCATA	2965	49.308758	10
CCCGATC	2920	48.991444	31
GCCCGAT	2955	48.637974	30