EGAF00005319273 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319273
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2549178
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	12207	0.4788602443611235	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7560	0.2965661872179973	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6563	0.2574555405703329	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5677	0.2226992387349961	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3482	0.13659305077950618	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3138	0.12309850469445446	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	2770	0.10866247864998049	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2140	61.707092	4
TCTACGG	2145	61.56325	5
TACGGCC	2155	61.437992	7
CTACGGC	2270	58.325493	6
ACGGCCA	2395	55.714375	8
CGGCCAT	2495	53.204227	9
GCCATAC	2510	53.015675	11
GGGTCTA	1915	52.00098	2
CCATACC	2595	51.14594	12
CCTGGTT	3755	49.653797	70
CATACCA	2680	49.523773	13
GGCCATA	2710	49.35816	10
GCGCGGT	3715	49.31767	9
GAACGCG	2715	48.034744	24
GCGTCTA	520	47.8759	2
CTGAACG	2745	47.74587	22
CCCGATC	2725	47.66638	31
TACCACC	2785	47.413067	15
CCGAACT	450	47.3466	67
ATCTCGT	2765	47.03139	35