EGAF00005319275 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319275
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2619325
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	12272	0.46851765244862703	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7760	0.29625953251314746	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6591	0.2516297137621334	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5743	0.21925496072461417	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3581	0.13671461158886353	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	2939	0.11220448016187377	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	2868	0.1094938581504777	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2355	62.967262	4
TCTACGG	2415	61.545986	5
TACGGCC	2405	61.38244	7
CTACGGC	2500	59.180286	6
ACGGCCA	2635	56.155785	8
CGGCCAT	2720	54.0196	9
GCCATAC	2745	53.02383	11
CCTGGTT	4095	52.183044	70
GCGCGGT	3755	51.651657	9
GGGTCTA	2290	51.472538	2
CCATACC	2830	51.309082	12
CGGTCTA	315	50.478214	2
GAACGCG	2955	49.647408	24
TGAACGC	2970	49.276398	23
CTGAACG	2970	49.156143	22
CATACCA	3005	48.78123	13
CGCGGTG	4030	48.127045	10
CCCGATC	3045	48.01331	31
CCGAACT	525	47.986233	67
GGCCATA	3085	47.852436	10