EGAF00005319280 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319280
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3260235
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	15649	0.47999607390264815	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	8523	0.2614228728910646	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	8168	0.25053408726671544	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	6202	0.19023168575271412	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4973	0.15253501664757294	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	4773	0.14640048953526358	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4196	0.128702378816251	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	3778	0.11588121715152436	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	3590	0.11011476166595353	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	3545	0.10873449306568392	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	3428	0.10514579470498292	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	3272	0.10036086355738161	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1225	42.434807	70
CGCGGCA	4970	35.39116	32
GCGGCAC	5070	34.645695	33
CGGCACC	5225	33.359406	34
CCCGTCG	4990	33.00485	44
TCGCCGG	5005	32.999268	48
CCGTCGC	4960	32.94825	45
TAGTCCG	285	32.604935	6
AGGACCG	485	32.574524	70
CCCCCGA	5565	31.508726	19
GTTATCG	165	31.287565	6
ACCCGCG	5665	31.07641	25
GCACCCC	5670	30.889282	36
CGCCCTA	875	30.703299	61
CCCCGAC	5845	30.010866	20
CACCCCC	5970	29.235804	37
ATGGCCG	1420	29.05998	69
GGCACCC	6015	28.874426	35
GTACGGG	1025	28.540363	5
GATAGGC	2860	28.429564	40