EGAF00005319284 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319284
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3244503
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	15542	0.47902560114754095	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	8602	0.26512535201847554	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	8210	0.25304337829245344	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	6184	0.1905992998003084	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5001	0.15413762909142018	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	4819	0.14852814129005276	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4238	0.13062093023184135	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	3638	0.11212811330425645	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	3636	0.11206647058116452	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	3604	0.11108018701169331	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	3460	0.10664191094907292	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	3398	0.1047309865332225	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	3252	0.10023106774751019	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1465	0.0	38.300533	70
CGCGGCA	4600	0.0	35.15141	32
GCGGCAC	4720	0.0	34.118954	33
CGGCACC	4875	0.0	32.975388	34
CCCGTCG	4605	0.0	32.52147	44
TATCGGA	150	0.0	32.14813	8
CCGTCGC	4655	0.0	32.114872	45
TCGCCGG	4690	0.0	32.094475	48
ATGGCCG	1450	0.0	31.635185	69
GTTCCGT	320	0.0	31.459976	1
GTACGGC	585	0.0	31.206057	14
CCCCCGA	5250	0.0	31.18855	19
ACCCGCG	5265	0.0	30.827564	25
TACGCGT	45	0.0046503353	30.630974	2
GCACCCC	5345	0.0	30.30316	36
TACGGCC	620	0.0	29.99998	15
CCCCGAC	5630	0.0	29.27574	20
CGCGAGA	640	0.0	28.597998	25
CACCCCC	5655	0.0	28.592646	37
CGCCCTA	965	0.0	28.18227	61