EGAF00005319306 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319306
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3629052
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	15471	0.42630968087533605	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	9193	0.2533168441785899	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	7587	0.2090628626980269	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	7057	0.19445849770132806	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5956	0.16411999607611022	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	5382	0.14830319323062882	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4519	0.12452287815109842	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	4458	0.12284199840619534	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	4328	0.119259795671156	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4077	0.11234338885196464	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	3799	0.10468298608011128	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1990	47.892746	70
CGCGGCA	4390	37.860554	32
GCGGCAC	4660	35.679768	33
ATGGCCG	2155	35.09936	69
TCGCCGG	4595	35.073498	48
CCGTCGC	4565	34.712406	45
CCCGTCG	4635	34.24088	44
CGGCACC	4870	34.080006	34
GCACCCC	5405	31.17703	36
CCCCCGA	5375	31.06861	19
ACCCGCG	5570	30.586975	25
GTTCCGT	455	30.351858	1
CACCCCC	5640	29.767834	37
GTGCCGT	605	29.674587	1
GACGTAT	305	29.669025	44
GATAGGC	2930	28.798634	40
CGTCGCC	5655	28.655022	46
GGCACCC	5865	28.424746	35
CCCCGAC	5930	28.108862	20
CGCCCTA	795	27.513603	61