EGAF00005319307 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319307
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3629052
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	19335	0.532783768322967	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	17928	0.49401331256757963	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	15611	0.4301674376669169	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12647	0.34849321530801985	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7904	0.21779792629039207	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5465	0.15059029189992318	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4513	0.12435754571717351	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3899	0.10743852664552617	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3778	0.10410432256137417	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3965	63.634144	4
TCTACGG	3970	63.380352	5
TACGGCC	3960	63.030327	7
CTACGGC	4085	61.515102	6
ACGGCCA	4225	59.648132	8
CGGCCAT	4380	57.222454	9
GCCATAC	4475	56.392097	11
CCATACC	4665	54.538715	12
CCGAACT	1340	54.524773	67
GCGCGGT	8220	54.271103	9
GGGTCTA	3370	54.003304	2
CATACCA	4805	52.948196	13
GGCCATA	4770	52.83299	10
GCCGGTT	1370	52.331005	3
GCGTCTA	920	52.07668	2
CCTGGTT	6955	52.000774	70
CGCGGTG	8765	51.014572	10
TGGCGCG	8785	50.73026	15
CGAACTT	1495	50.47533	68
ATACCAC	5130	49.58625	14