EGAF00005319311 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319311
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3143902
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	21132	0.6721583560810738	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12143	0.38623977464946424	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10334	0.3286998131621151	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7574	0.24091081719468355	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7061	0.22459351468334574	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5931	0.18865091850827412	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5804	0.18461135238948287	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3886	0.12360436171356486	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3620	0.11514353818916746	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3217	0.1023250724736331	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	4105	62.25615	4
TCTACGG	4155	61.506985	5
TACGGCC	4130	61.462593	7
CTACGGC	4295	59.34257	6
ACGGCCA	4360	58.2998	8
CGGCCAT	4510	56.361687	9
GCCATAC	4500	55.880585	11
GCGTCTA	890	55.05799	2
GGGTCTA	3380	54.543118	2
CGTCTAC	1000	53.791252	3
CCATACC	4680	53.731327	12
CATACCA	4735	53.251915	13
GGCCATA	4830	52.771114	10
GCGCGGT	6020	52.239956	9
CGGTTCA	915	51.66716	5
CGGGTAG	360	51.596153	1
TACCACC	4980	50.907265	15
CCGAACT	1000	50.186825	67
GCCGGTT	955	49.150646	3
ATACCAC	5210	49.05446	14