EGAF00005319317 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319317
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3181629
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	20337	0.6392008621998354	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12602	0.3960864073089603	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10848	0.3409574152108873	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7612	0.23924851074716758	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7371	0.23167377466071626	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6034	0.18965127612301746	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5697	0.17905921777806275	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3995	0.12556460857001242	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3778	0.11874420304818696	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3372	0.10598344432993288	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	4200	63.204403	5
GTCTACG	4220	63.06223	4
TACGGCC	4245	62.212616	7
CTACGGC	4330	61.149567	6
ACGGCCA	4490	58.81794	8
CGGCCAT	4555	57.750282	9
GCGTCTA	875	57.148594	2
GCCATAC	4620	56.715366	11
GGGTCTA	3385	56.661762	2
CCATACC	4750	55.160545	12
CATACCA	4830	54.60061	13
GGCCATA	4885	53.919147	10
CGGTCTA	535	53.77572	2
CGTCTAC	1065	53.063396	3
TACCACC	5060	52.119583	15
GCGCGGT	5815	52.010647	9
CCTGGTT	7365	50.24532	70
ATACCAC	5295	49.80644	14
CCGAACT	945	48.913662	67
GCCGGTT	960	48.87762	3