EGAF00005319321 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319321
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3497019
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	18564	0.5308521343464248	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11254	0.32181695323931614	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9916	0.28355579423503274	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9674	0.2766356145048111	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5633	0.16108005132371314	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4520	0.12925294372149537	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4492	0.1284522617692383	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3890	0.11123759979571173	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3601	0.10297341821705859	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3850	63.543354	4
TCTACGG	3855	63.371304	5
TACGGCC	3905	62.64838	7
CTACGGC	4000	61.074093	6
ACGGCCA	4275	57.307003	8
CGGCCAT	4315	56.77577	9
GCCATAC	4375	55.992325	11
GGGTCTA	3160	55.445744	2
CCATACC	4620	52.948246	12
CATACCA	4705	52.065125	13
GCGTCTA	910	52.026722	2
GGCCATA	4745	51.77111	10
GCCGGTT	930	51.64514	3
CCTGGTT	6705	51.50308	70
CCGAACT	970	49.83746	67
GCGCGGT	5525	49.219826	9
CTGAACG	4945	49.024837	22
CGTCTAC	1090	48.819332	3
TACCACC	5025	48.47797	15
ATACCAC	5090	48.398518	14