EGAF00005319323 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319323
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3585477
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	18618	0.5192614539153367	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11439	0.3190370486270028	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10022	0.2795165050563705	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9862	0.2750540583582045	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5566	0.1552373645124484	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4532	0.12639880272555087	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4504	0.12561787455337184	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3790	0.10570420616280622	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3642	0.10157644296700272	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	3920	62.388477	7
GTCTACG	3950	62.077408	4
TCTACGG	3980	61.696266	5
CTACGGC	4055	60.389866	6
ACGGCCA	4330	56.64057	8
CGGCCAT	4415	55.23714	9
GCCATAC	4475	54.727337	11
GGGTCTA	3350	54.22898	2
CCATACC	4605	53.107365	12
CATACCA	4700	52.252213	13
CCTGGTT	6745	51.73896	70
CGTCTAC	1010	51.632347	3
GCGCGGT	5550	51.53408	9
GCGTCTA	890	51.224113	2
CCGAACT	1015	50.49859	67
GGCCATA	4890	50.366047	10
TGGCGCG	5870	48.714527	15
TACCACC	5030	48.67932	15
ATACCAC	5080	48.338184	14
CTGAACG	5095	48.300056	22