EGAF00005319325 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319325
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3545701
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	18328	0.5169076580343351	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11001	0.3102630481250393	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9901	0.27923956362930774	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9595	0.27060939430594966	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5574	0.157204456890189	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4511	0.1272244896002229	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4452	0.12556050270454278	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3868	0.10908985275408162	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3590	0.10124937212697856	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	3855	63.090195	7
GTCTACG	3885	62.86801	4
TCTACGG	3905	62.369976	5
CTACGGC	3965	61.3399	6
ACGGCCA	4160	58.464596	8
CGGCCAT	4385	55.46392	9
GCCATAC	4415	54.461052	11
GGCCATA	4510	53.77347	10
CATACCA	4515	53.56013	13
GGGTCTA	3215	53.511818	2
CGGTCTA	590	52.697723	2
CCATACC	4595	52.478016	12
CCTGGTT	6445	52.441746	70
CGTCTAC	975	52.08517	3
GCGCGGT	5805	51.477962	9
GCGTCTA	865	50.721134	2
TACCACC	4905	49.090233	15
CGCGGTG	6135	48.821606	10
GAACGCG	4975	48.80319	24
TGAACGC	5010	48.65904	23