EGAF00005319331 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319331
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3418289
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	11344	0.3318619344356197	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10444	0.3055329727825822	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9394	0.27481585085403837	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9104	0.26633207432139294	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4806	0.1405966552272204	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3806	0.11134225339051204	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2360	60.462925	5
GTCTACG	2360	60.31617	4
TACGGCC	2405	59.33073	7
CTACGGC	2465	57.884884	6
CGGCCAT	2780	51.82581	9
GCGCGGT	4810	50.618332	9
GCCATAC	2840	50.60895	11
ACGGCCA	2840	50.60895	8
GCGTCTA	530	50.318203	2
CCATACC	2995	47.874153	12
GGGTCTA	2275	47.803375	2
TGGCGCG	5075	47.632595	15
CATACCA	3065	46.66778	13
CCGAACT	780	45.771133	67
CGGCATA	275	45.62565	1
GAACGCG	3135	45.426746	24
CGAACTT	820	45.16351	68
CTGAACG	3165	45.095078	22
TGAACGC	3175	45.068096	23
CCTGGTT	4555	44.712536	70