EGAF00005319332 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319332
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3417723
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	12869	0.3765372442412682	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	7164	0.20961324250092828	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	5860	0.1714591849602791	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5645	0.16516844694552485	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	4975	0.14556475173675573	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	4263	0.124732168171616	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4082	0.11943624454059033	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	3454	0.10106143768819183	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1280	0.0	38.332577	70
CGCGGCA	3890	0.0	38.167576	32
GCGGCAC	3990	0.0	37.30231	33
CCCGTCG	3855	0.0	36.98382	44
TCGCCGG	3865	0.0	36.940792	48
CCGTCGC	3955	0.0	36.23307	45
CGGCACC	4120	0.0	36.130592	34
GTTCCGT	355	0.0	34.482697	1
GCACCCC	4600	0.0	32.59917	36
CCCCCGA	4620	0.0	32.39389	19
ACCCGCG	4675	0.0	32.10287	25
CACCCCC	4725	0.0	31.597246	37
GGCACCC	4850	0.0	30.913813	35
AGGACCG	525	0.0	30.831661	70
CCCCGAC	5135	0.0	29.146746	20
ATGGCCG	1320	0.0	28.506712	69
AGTCCGC	5370	0.0	27.796951	7
TCCGCCC	5885	0.0	27.012226	9
CAGTCCG	5235	0.0	26.926004	6
CGTACGT	155	4.9112714E-11	26.820747	19