EGAF00005319343 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319343
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3491056
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	13767	0.39435059191259036	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11599	0.33224903868628863	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10175	0.29145908859668823	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9516	0.2725822788290993	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5388	0.1543372549738532	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3939	0.11283118918745502	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3828	0.10965163549367299	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2880	62.244263	5
GTCTACG	2880	62.003937	4
TACGGCC	2920	61.036926	7
CTACGGC	2960	60.79581	6
ACGGCCA	3240	55.22221	8
GCCATAC	3325	53.906097	11
CGGCCAT	3350	53.30564	9
CCATACC	3435	51.984344	12
GCGCGGT	5995	51.896587	9
GCGTCTA	605	49.76308	2
GGCCATA	3590	49.74203	10
GGGTCTA	2575	49.72421	2
TGGCGCG	6300	49.160877	15
CATACCA	3635	48.838524	13
CCGAACT	865	48.69039	67
CGCGGTG	6495	47.901466	10
CGGGTAG	570	47.594124	1
GAACGCG	3845	46.565853	24
CCTGGTT	5330	46.55242	70
TGAACGC	3865	46.32024	23